BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C05LP1|AL425238
(1003 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1411 163 7e-40
>3x_Contig1411
Length = 7271
Score = 163 bits (82), Expect = 7e-40
Identities = 101/108 (93%)
Strand = Plus / Minus
Query: 889 tgatcaagggaaagctgcttctatagcccactggtagcagtatttgaatcgctctttctg 948
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||
Sbjct: 7271 tgatcaagggaaagctgcttctatagcccactggtagcagtatgtgaatcgttctttttg 7212
Query: 949 atttaatagtaccggcggtggaggtgktatctggcgtcgaaactgccg 996
||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7211 tttttttagtaccggcggtggaggtgttatctggcgtcgaaactgccg 7164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7523
Number of Sequences: 1807
Number of extensions: 7523
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 1003
length of database: 10,358,551
effective HSP length: 16
effective length of query: 987
effective length of database: 10,329,639
effective search space: 10195353693
effective search space used: 10195353693
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)